MegaBrain Science

A workbench
for rigorous science.

The MegaBrain Science app runs analyses, searches databases, and traces every step from data wrangling to publication — so you can spend your time on science.

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Compute runs on your machine · macOS & Linux

See how it compares to Claude Science, Google Co-Scientist & more →

MegaBrain Science — Cross-species scRNA
Session

PubMed retrieval complete. Eight benchmark papers resolved and verified against title and first author; four supplied PMIDs were corrected, two off-topic hits omitted.

Reviewer · Verified · 8 checks
>>>integrate(species=[ "mouse", "human"])
kernel · idle · shared with the agent
What it does

An app that does the science,
right where your data lives.

Runs analyses locally

The heavy compute happens on your machine — a live kernel the agent shares. Load a dataset, iterate on it, and never wait on a round-trip or hand your data to a server.

Searches the literature

Query PubMed, OpenAlex, and arXiv from inside the workbench. The agent resolves DOIs, verifies against title and first author, and drops off-topic hits.

Traces every step

From data wrangling to publication, each result traces to the exact code, data hash, and environment — a reproducible record you can hand to a reviewer.

Checks its own work

An independent Reviewer re-derives your headline result in a clean kernel and returns a verdict — Verified, Inconclusive, or Refuted — before you trust it.

Local by design

The compute happens on your machine.

MegaBrain Science is a desktop app, not a browser tab. The kernel, your files, and the analysis all run locally — so proprietary datasets, unpublished results, and regulated data never leave your hardware. The agent's reasoning runs in the cloud via the MegaBrain Gateway; your data stays put.

Read the docs
  • Zero round-trip latency per cell
  • No dataset bytes leave your machine
  • Bring your own data sources and secrets
  • Optional cloud runtime for sharing & long jobs
How it works

From download to publication

01

Download the app

Native builds for Apple Silicon, Intel Macs, and Linux. Install once — the compute runtime ships inside.

02

Point it at your data

Open a project on files that live on your disk. Nothing uploads; the kernel reads them in place.

03

Do the science

The agent runs code, searches databases, and drafts the write-up — while the Reviewer verifies each result.

Built for your field

Pre-configured skills, 60+ databases, native renderers

Curated skills and connectors per domain, literature and database search with citations the reviewer verifies, and scientific artifacts rendered in their native form — all on the MegaBrain Gateway.

Native scientific renderers

Inspect 3D protein structures, genome-browser tracks, chemical structures, sequence alignments, and PDFs in their native form.

Persistent Python & R kernels

Variables, dataframes, and loaded models stay in memory across analyses — in whichever language your field uses.

Scales to HPC & GPUs

Attach a kernel over SSH to a Linux box or HPC login node, submit batch jobs, and burst from one GPU to hundreds on demand.

Draft manuscripts in place

Write up results next to the analysis with rendered Markdown and LaTeX — every figure linked to the code that made it.

Domains

GenomicsSingle-cellProteomicsStructural biologyCheminformaticsClinicalMaterialsPhysicsML

Databases

UniProtPDBEnsemblReactomeClinVarChEMBLGEOPubMedOpenAlexbioRxiv

Spend your time on science, not on wrangling.

Download MegaBrain Science and run your first verified analysis in minutes — on your own machine.

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